Explore projects
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Martin Larralde / mini3di
BSD 3-Clause "New" or "Revised" LicenseA NumPy port of the foldseek code for encoding protein structures to 3di.
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Renato Alves / embltilities
GNU General Public License v3.0 onlyUpdated -
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Johannes Mammen / diagnFlow
Creative Commons Attribution 4.0 InternationalUpdated -
IC / MINFLUX microtubule width measurement
BSD 2-Clause "Simplified" LicenseCyntha van den Berg - Utrecht University; Anna Akhmanova - Utrecht University; Sebastian Schnorrenberg - ICLM; Ziqiang Huang - ICLM; Line Filter, Intensity Profile Plot, Fiji
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Jean-Karim Heriche / omeRarr
MIT LicenseExtends the Rarr package to deal with images in ome-zarr format.
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Krim Anlas - Trivedi lab;
Nicola Gritti - MIF
Keywords: bioimage analysis, support, MIF, python, matlab, TGMM, gastruloids, TGMM, tracking
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Ivo Fierro / machine_learning_scripts
MIT LicenseUpdated -
Martin Larralde / peptides.py
GNU General Public License v3.0 onlyPhysicochemical properties and indices for amino-acid sequences (ported from R).
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Nick Marschlich - Trivedi lab;
Nicola Gritti - MIF
Keywords: bioimage analysis, support, MIF, python, pescoids, ultrack, ome-zarr, napari, tracking
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