Preparing for the curse setup notes
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Add info on how to connect to the cluster from different OS - powershell does not work for Windows
- make link to this page https://bio-it.embl.de/newcomer-guide/4-technical-setup/, for Windows recommended software is PuTTY
- Is this warning meaningful? (gnome-ssh-askpass:4075494): Gtk-WARNING **: 09:59:33.101: cannot open display: error: unable to read askpass response from '/usr/libexec/openssh/gnome-ssh-askpass' - this warning is fine, probably git complains that it cannot store the password in gnome-keyring
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How to work with tmux (attach, detach, select session) - added explanation in readme -
Does it matter which folder in R? -
What happens to R session when it is closed? - I checked and it continues running even when the browser window is closed -
HIghlight things to select in jupyterlab -
renv section unclear - how can it be restored? - added explanation in readme -
advantages of running multiple commands with &&? - it's not necessary, so deleted -
prepare multiQC discussion -
Add chekcing contents of salmon pipeline output on screen (read counts in terminal, multiQC from Rstudio -> open in browser)
Edited by Bartosz Jan Bartmanski