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Tools to process imaging and FCS data for FCS calibrated imaging

A fork of the Bio-IT repository for materials associated with teaching image analysis. See https://stamper.embl-community.io/image-analysis-training-resources/ for rendered pages.

Course materials for image analysis with the scientific Python stack (numpy/scipy/scikit-image/matplotlib)

Metagenomics and metatranscriptomics integration

A repository for materials associated with teaching image analysis. See https://grp-bio-it.embl-community.io/image-analysis-training-resources/ for rendered pages.

A script to count the number of sequences in a FASTA file.

Analyses scripts and Rmarkdown vignettes for graper manuscript.

R package for group-adaptive penalized regression