Explore projects

Image Analysis for microscopy of high precision cut lung slices (hPCLS)

SNV calling software

Read-only mirror of: https://github.com/tobyhodges/regex-introduction

Website at: https://grp-bio-it-workshops.embl-community.io/regex-introduction

Summary of my mechanical keyboard and black mouse.

Open source framework for segmenting and tracking kinetochores from 4D live-cell imaging data.

Code notebooks to illustrate the use of the LOMAR package and produce figure material for the LOMAR paper.

A fork of the Bio-IT repository for materials associated with teaching image analysis. See https://stamper.embl-community.io/image-analysis-training-resources/ for rendered pages.

Immunofluorescence based assay for detecting immunity against covid-19. Collaboration with Vibor Lateka.

This is an example how snakemake can detected failed slurm jobs.