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Slides from the panel discussion on Research Data Management at EMBL, October 30th 2018.

EMBL Python User Group

EMBL Bio-IT Community Documentation. https://grp-bio-it.embl-community.io/docs

A simple workflow for scRNAseq analysis

A script to count the number of sequences in a FASTA file.

Overlap_huminvs_with_elements

Scripts associated with the paper "Disentangling the impact of genetic and environmental factors on the proteotypes across individuals"

editing the gencode v23 tRNA annotation

Perl API to the Mitocheck database

Materials for the Bio-IT "Image Processing with Python" course. Materials have been adapted from those originally forked from Karin Sasaki's GitHub repo.

ZEN Black Visual Basic code and ImageJ Jython scripts to enable the user to manually select the point where the next image is taken.

Command line tool to download raw reads from ENA

"Protein Bioinformatics for Beginners" course material

NOTE: the project has been moved to https://gitlab.com/gchojnowski/af2wrapper

A script to count the number of sequences in a FASTA file.

A collection of droplet macros for Fiji

A script to count the number of sequences in a FASTA file.

Material for an intermediate-level course on Git & various features of EMBL's GitLab.

Day 1-2 Integration of Transcriptome and Proteome Data Matt Rogon Livia Perfetto Manjeet Kumar

Material for the EMBL-EBI Predoc Week, November 2017