Explore projects

Metagenomics and metatranscriptomics integration

EMBL Python User Group fork

Sergi Lopez Serrano - Meyerhans lab (UPF);

Montserrat Coll Llado - MIF;

Nicola Gritti - MIF

Keywords: bioimage analysis, support, Luxendo, MuVi SPIM, MIF, external

Quick paired-end deinterlacer for Galaxy.

Image Analysis for microscopy of high precision cut lung slices (hPCLS)

galaxy tool to shift read position in a BAM file. Pretty handy for ATAC-seq. The shell script can also be used directly. Resulting BAM is sorted.

Snakemake biological workflow management tutorial

EMBL Python User Group

GRaNIE R package for building eGRNs