Explore projects
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Martin Larralde / mini3di
BSD 3-Clause "New" or "Revised" LicenseA NumPy port of the foldseek code for encoding protein structures to 3di.
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Martin Larralde / lightmotif
MIT LicenseA lightweight platform-accelerated library for biological motif scanning using position weight matrices.
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Martin Larralde / Pyskani
MIT LicensePyO3 bindings and Python interface to skani, a method for fast fast genomic identity calculation using sparse chaining.
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Marco Raffaele Cosenza / strandtools
MIT LicenseUpdated -
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Deployment configuration for the Bretzel App project.
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Repository for the "Inference and evaluation of enhancer‐mediated gene regulatory networks with GRaNIE and GRaNPA" module of the "Systems biology: from large datasets to biological insight (2024)" course (https://www.ebi.ac.uk/training/events/systems-biology-large-datasets-biological-insight-2)
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Franziska Walterspiel - Deo Group, EMBL Heidelberg;
Christian Tischer, Arif Khan - Bioimage Analysis Service Team, EMBL Heidelberg;
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Savitski Team / GPMelt
GNU Affero General Public License v3.0Updated -