Explore projects

This source code extracts distributions of nups inside core and non-core regions; and was developed to quantify different nups for the manuscript below: Otsuka "A quantitative map of nuclear pore assembly reveals two distinct mechanisms"

Interactive tutorial on hypothesis testing in R

This source code extracts distributions of nups inside core and non-core regions; and was developed to quantify different nups for the manuscript below: Otsuka "A quantitative map of nuclear pore assembly reveals two distinct mechanisms"

https://grp-bio-it-workshops.embl-community.io/carpentries-lesson-example

Server to implement image analysis jobs for online use (e.g. in feedback microscopy), including adapters to ilastik and TensorFlow.

GRaNIE R package for building eGRNs

Cython bindings and Python interface to SWORD (Smith Waterman On Reduced Database), a method for fast database search.