model_map_generation.md

@@ -14,10 +14,11 @@ This procedure generates three files:
   
 - `pdb3j5p_4locscale.pdb`                 __(shifted) PDB model with same P1 unit cell as EM map__ 
 - `pdb3j5p_4locscale.mrc`                   __(shifted) reference model map__
-- `emd_5778_full_4locscale.mrc`      __(shifted) original reconstruction__
+- `emd_5778_full_4locscale.mrc`      __(shifted) original reconstruction__  
+- `emd_5778_mask.mrc`      __(shifted) mask__
 
 <br>
-The two MRC maps produced (`pdb3j5p_4locscale.mrc` and `emd_5778_full_4locscale.mrc`) are to be used for input in the LocScale procedure.  
+The two MRC maps produced (`pdb3j5p_4locscale.mrc` and `emd_5778_full_4locscale.mrc`) along with the mask (`emd_5778_mask_4locscale.mrc`) are to be used for input in the LocScale procedure.  
   
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 **NOTE**: