Added data.table to list of required packages. authored by Jean-Karim Heriche's avatar Jean-Karim Heriche
...@@ -3,12 +3,12 @@ Note: These instructions assume a Linux operating system. They've been shown to ...@@ -3,12 +3,12 @@ Note: These instructions assume a Linux operating system. They've been shown to
## Requirements ## Requirements
The IDE needs a computer with an [R environment version >=3.5.0](https://www.r-project.org/). The IDE requires some R packages and will try to install them if it can't detect them on the system. In case of problems, it may be better to install the required packages manually. The IDE needs a computer with an [R environment version >=3.5.0](https://www.r-project.org/). The IDE requires some R packages and will try to install them if it can't detect them on the system. In case of problems, it may be better to install the required packages manually.
The IDE requires the following packages from CRAN: devtools, DT, shiny, shinyFiles, shinycssloaders, shinydashboard, shinyjs, shinyWidgets, shinybusy, assertthat, ggplot2, plotly, RANN, MASS, uwot, xgboost, Ckmeans.1d.dp, e1071, caret, RColorBrewer. The IDE requires the following packages from CRAN: devtools, data.table, DT, shiny, shinyFiles, shinycssloaders, shinydashboard, shinyjs, shinyWidgets, shinybusy, assertthat, ggplot2, plotly, RANN, MASS, uwot, xgboost, Ckmeans.1d.dp, e1071, caret, RColorBrewer.
From within an R console, install with: From within an R console, install with:
``` ```
> install.packages("devtools", "DT", "shiny", "shinyFiles", "shinycssloaders", "shinydashboard", "shinyjs", "shinyWidgets", "shinybusy", "assertthat", "ggplot2", "plotly", "RANN", "MASS", "uwot", "xgboost", "Ckmeans.1d.dp", "e1071", "caret", "RColorBrewer") > install.packages("devtools", "data.table", "DT", "shiny", "shinyFiles", "shinycssloaders", "shinydashboard", "shinyjs", "shinyWidgets", "shinybusy", "assertthat", "ggplot2", "plotly", "RANN", "MASS", "uwot", "xgboost", "Ckmeans.1d.dp", "e1071", "caret", "RColorBrewer")
``` ```
and from Bioconductor: EBImage and RBioFormats and from Bioconductor: EBImage and RBioFormats
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